# 2017 Spring: BIODS 215

Welcome to BIODS215 Topics in Biomedical Data Science: Large-scale inference!

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### Teaching team

#### Instructors

### Course content

# | Date | Lecturer | Topic | Lecture slides | Readings | Assignments |
---|---|---|---|---|---|---|

1 | 4/4/2017 | Manuel | Intro to biomedical data, computing, and data repositories | slides | D. Donoho. 50 years of Data Science | |

2 | 4/6/2017 | Manuel | Model comparison and hypothesis testing | slides(pdf), slides(html) | ||

3 | 4/11/2017 | Manuel | Meta-analysis and variance-components | slides; sample codes | ||

4 | 4/13/2017 | Manuel | Regression - The Linear model | slides; sample codes | ||

5 | 4/18/2017 | James Z. | Sampling algorithms for inference | |||

6 | 4/20/2017 | Julia S. | Permutation testing and monte carlo for p-value and FDR computation | slides | ||

7 | 4/25/2017 | Julia S | Poisson Arrivals | |||

8 | 4/27/2017 | Julia S | Martingales | HW1 due 5/9/2017 | ||

9 | 5/2/2017 | Manuel | Hierarchical modeling | slides | ||

10 | 5/4/2017 | Manuel | Mixture model case studies and computation | slides | ||

11 | 5/9/2017 | Manuel | High-dimensional inference methods on summary statistics | |||

12 | 5/11/2017 | Manuel, James, and Julia S | Students present project plans | |||

13 | 5/16/2017 | Prof. Julia Palacios | Guest lecture: Gaussian Process regression | supplementary materials | ||

14 | 5/18/2017 | Prof. Julia Palacios | Guest lecture: Gaussian Process regression | supplementary materials | HW2 due 5/29/2017 | |

15 | 5/23/2017 | Julia S. | Advanced modern topics in statistical cancer genomics (with normal population variation as controls) | |||

16 | 5/25/2017 | James Z. | Search engine data for public health | |||

17 | 5/30/2017 | James Z. | Deep learning | |||

18 | 6/1/2017 | Manuel | Inference, prediction, and risk modeling from biomedical data repositories | |||

19 | 6/6/2017 | Manuel, James, Julia S | Final Project presentations |